Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870571.1_cds_XP_016434155.1_30242
CDS Infomation

[gene=LOC107760595] [db_xref=GeneID:107760595] [protein=cyclase-associated protein 1-like] [protein_id=XP_016434155.1] [location=join(133726..134010,135328..135493,135567..135631,136550..136859,136930..137077,137159..137268,137364..137419,137503..137559,137693..137836,138108..138194)] [gbkey=CDS]
Sequence

ATGTCAATGGAGGAGAAGTTGATACAGCGATTGGAGTCGGCGGTGACACGGCTGGAGGCG
CTATCAGCCACCGGCTTCCATTCCGGAGGTTCCGTCGGGACAGGCGATGATACGGTGGTT
TTAGATCCGTCGATTATTGCATTTGACGATCTGAGGTCGGAGTTCCTCGGGAAGGTTACG
AGTGCTGCGGAGAAGATCGGAGGAAAAGTATTGGATATTACTAAGATTGTTGAGAAGGCT
TTCTCCGTTCAGAGAGAACTTCTCATTAAAATCAAGGAAACTAAGAAACCAGACAACTCA
GGTTTGGTTGAATTTCTCAAACCTTTGAATGATGCGATCGTGAAAGCTACAAGAATGACT
GAAGGACGGCCTGATTTCTTTAACCACTTGAAGTCTGCTGCTGATAGTCTATCTGCTCTT
GCATGGATTGCATACACTGGAAAAGATTGCGGCCTAAGCATGCCTATTGCGCACGTGGAA
GAAGGTTGGCAGATGGCTGAATTTTATAATAACAAGATTCTTGTGGAGTTCAAAAACAAA
GATGCAAATCATGTTGAGTGGGCAAAGGCTTTGAAAGAACTTTATCTCCCTGGCTTGAGA
GATTATGTTAAGAGCCACTATCCATTAGGTCCTGTATGGAGTGCAACAGGGAAAGCTGCT
GTATCTGCACCATCAAATGCTCCTTCACCAAGTGCTCCTGCTCCTCCGGCTCCACCTCCA
GCTTCTCTCTTCAGCTCTGAATCTCCTCAGGCTTCATCATCACGCCCCAAGCAAGGGATG
GCTGCTGTTTTTGATGAAATTAATTCAGGAAAGCCAGTGACTTCTGGATTGAGAAAGGTA
ACAGATGATATGAAGGCAAAGAACCGTGCCGACAGAACAGGCGTTGTTAATGCTGGTGAA
AAAGAAGCCCACATGAGCTCACCCTATATCTCTAAAACTGGACCTGCAAAATTGGAGCTT
CAGATGGGCCGTAAATGGGTGGTTGAGAATCAAGTGGGAGAGAAGAATCTAGTTATTGAT
GACTGTGATGCAAAGCAATCAGTATATGTCTATGGGTGCAAAGGTTCAGTTCTTCAGATC
AAAGGAAAAGTCAACAACATCACAATTGACAAGTGCACTAAGATGGGAGTTGTATGTGCG
GGTGTAGTGGCAGCTTGTGAGGTCGTCAATTGCAATGGTGTGGAGGTGCAATGTCAGGGC
TCGGCTCCTACAATATCAGTTGACAATACAACTGGGTGCCAGTTATACTTGAGCAAAGAT
TCTTTGGGGGGTTCTATTACCACAGCTAAGTCAAGTGAAATCAATGTTATGGTTCCTGGT
GCAGGGCCTGATGATGATTGGGGTGAGCATGCTTTGCCACAGCAGTATGCTCATGTATAC
AAGGATGGACACTTTGTGACTACTCCTGTCTCCCACTCTGGAGCTTAA

Peptide Sequence

PEP ID

XP_016434155.1
PEP Infomation

PREDICTED: cyclase-associated protein 1-like [Nicotiana tabacum]
Sequence

MSMEEKLIQRLESAVTRLEALSATGFHSGGSVGTGDDTVVLDPSIIAFDDLRSEFLGKVT
SAAEKIGGKVLDITKIVEKAFSVQRELLIKIKETKKPDNSGLVEFLKPLNDAIVKATRMT
EGRPDFFNHLKSAADSLSALAWIAYTGKDCGLSMPIAHVEEGWQMAEFYNNKILVEFKNK
DANHVEWAKALKELYLPGLRDYVKSHYPLGPVWSATGKAAVSAPSNAPSPSAPAPPAPPP
ASLFSSESPQASSSRPKQGMAAVFDEINSGKPVTSGLRKVTDDMKAKNRADRTGVVNAGE
KEAHMSSPYISKTGPAKLELQMGRKWVVENQVGEKNLVIDDCDAKQSVYVYGCKGSVLQI
KGKVNNITIDKCTKMGVVCAGVVAACEVVNCNGVEVQCQGSAPTISVDNTTGCQLYLSKD
SLGGSITTAKSSEINVMVPGAGPDDDWGEHALPQQYAHVYKDGHFVTTPVSHSGA

Transcript Sequence

Gene sequence data has not been registered.